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LocalAlignmentStringKernel.cpp File Reference

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Macros

#define LOGP(x, y)   LogSum(x,y)
 

Functions

static int32_t BINDEX (int32_t i, int32_t j)
 

Variables

const int32_t NAA =20
 
const int32_t NLET =26
 
const float64_t SCALING =0.1
 
const float64_t LOG0 =-10000
 
const float64_t INTSCALE =1000.0
 

Macro Definition Documentation

#define LOGP (   x,
 
)    LogSum(x,y)

Definition at line 85 of file LocalAlignmentStringKernel.cpp.

Function Documentation

static int32_t BINDEX ( int32_t  i,
int32_t  j 
)
static

Definition at line 68 of file LocalAlignmentStringKernel.cpp.

Variable Documentation

const float64_t INTSCALE =1000.0

Definition at line 94 of file LocalAlignmentStringKernel.cpp.

const float64_t LOG0 =-10000

Definition at line 93 of file LocalAlignmentStringKernel.cpp.

const int32_t NAA =20

Definition at line 36 of file LocalAlignmentStringKernel.cpp.

const int32_t NLET =26

Definition at line 37 of file LocalAlignmentStringKernel.cpp.

const float64_t SCALING =0.1

Definition at line 77 of file LocalAlignmentStringKernel.cpp.


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