Open in new window / Try shogun cloud
--- Log opened Thu Sep 05 00:00:45 2013
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travis-ci[travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1099082900:06
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travis-ci[travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1099046700:20
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travis-ci[travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1099134400:31
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1099266200:34
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shogun-buildbotbuild #1385 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1385  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>00:36
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1099313800:41
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shogun-buildbotbuild #514 of nightly_default is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/51403:28
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shogunuser2Hello05:43
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lisitsynokay I am heading to moscow see you saturday :)08:12
lisitsynsonne|work: I'll mail you whether they approve my visa or not08:12
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shogun-notifier-shogun: Soeren Sonnenburg :develop * f53a70b / examples/undocumented/python_modular/ (7 files): https://github.com/shogun-toolbox/shogun/commit/f53a70b870a2274c6a64aa65c1f8f3cc71e6f51c09:41
shogun-notifier-shogun: convert more examples to CSVFile / shogun infrastructure09:41
shogun-buildbotbuild #1994 of deb1 - libshogun is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/1994  blamelist: Soeren Sonnenburg <sonne@debian.org>09:43
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sonne|worklisitsyn good luck!09:47
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1100578709:49
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shogun-notifier-shogun: Soeren Sonnenburg :develop * 38347f2 / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/38347f23ff42ea309daadd03c7b8c909b106247409:58
shogun-notifier-shogun: drop duplicate JSON detection09:58
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shogun-buildbotbuild #1995 of deb1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/199510:10
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thoralfHey.10:17
sonne|workHo HOoa3o4j!10:18
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thoralfsonne|work: You're okay? ;)10:25
sonne|workthoralf: mushroom season you know %-)10:25
thoralfsonne|work: Yesterday we didn't finish talking about my PR.10:25
thoralfsonne|work: lol :)10:25
thoralfsonne|work: We can drop it, no problem.  But it would be cool to learn whats wrong.10:26
thoralfsonne|work: https://github.com/shogun-toolbox/shogun/pull/152510:27
shogun-buildbotbuild #1606 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1606  blamelist: Soeren Sonnenburg <sonne@debian.org>10:35
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1100628110:51
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@iglesiasghello comrades10:55
shogun-buildbotbuild #1689 of deb3 - modular_interfaces is complete: Failure [failed install test python_modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1689  blamelist: Soeren Sonnenburg <sonne@debian.org>11:10
shogun-buildbotbuild #1386 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1386  blamelist: Soeren Sonnenburg <sonne@debian.org>11:12
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jey1401Hi everybody11:28
@iglesiasgHi11:29
jey1401I had a hard time installing the r_static interface of shogun 2.1.0 on R3.0.1. I've foud 2 bugs one in the ./configure file and one in the ./src/interfaces/r_static/RInterface.cpp file11:30
@iglesiasgahm I see11:30
@iglesiasgWe are  not supporting the configure script any longer since we switched to CMake11:30
jey1401I already submitted a pull request for the RInterface.cpp file. I'd like to do so for the ./configure file but I can't find it on github11:31
jey1401Mhh ok11:31
jey1401so let's hope it'll be completely fixed in the next release :-)11:32
jey1401thanks !11:32
@iglesiasgUnfortunately we do not have the static interfaces part in CMake yet11:32
@iglesiasgBut we are looking forward to doing it11:32
@iglesiasgWould you be interested in doing that?11:33
@iglesiasgNone is working on that right now, as far as I know11:33
thoralfwiking: Found a bug in our cmake setup: class_list.cpp is generated outside the build directory (and not updated when header files are removed)11:34
jey1401I'm afraid I don't have time and skill to do that. I'm not fluent at all in c/c++...11:34
@iglesiasgjey1401, aham I see. I don't think actually that requires much C++, but CMake skills11:35
@iglesiasganyway, I hope we will get static back some time soon11:35
thoralfwiking: What triggers the update of class_list.cpp?11:37
jey1401I hope so, shogun is realy a nice tool. Anyway, thanks for your fast answers.11:39
jey1401See you11:39
@iglesiasgjey1401, Thanks! Hope you can use Shogun for your work. Good luck!11:39
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thoralfWhy are most of the classes prefixed with "C"?  Does it have any special meaning?11:46
thoralfHey HeikoS11:46
@iglesiasgC stands for Class I believe11:46
thoralfiglesiasg: But there is some magic in the compile process, right?11:47
sonne|workthoralf: historically but yes - nowadays we serialize classes prefixed with C11:47
@HeikoSthoralf: hi!11:47
thoralfiglesiasg: It's different if I add a C or remove it.11:47
@iglesiasgthoralf, mm not AFAIK11:47
@HeikoSnah NIPS rejected :(11:47
@iglesiasgHeikoS, oh, I am sorry man11:47
@iglesiasgthe paper you sent?11:48
@HeikoSyes11:48
@iglesiasgthey are the ones who are missing one your talks now!11:48
@HeikoShaha, yeah :) I guess thats life11:48
@HeikoSnow we pimp it and send it to ICML, which is in Beijing :)11:48
@iglesiasgwhat reason did they give you?11:48
shogun-notifier-shogun: Thoralf Klein :develop * b7b0ba7 / src/shogun/lib/SGSparseVector.cpp: https://github.com/shogun-toolbox/shogun/commit/b7b0ba73b8698207d9256ac90b1d1292299c315b11:49
shogun-notifier-shogun: Removing code duplication by proper templating&specialization.11:49
shogun-notifier-shogun: Soeren Sonnenburg :develop * b78662a / src/shogun/lib/SGSparseVector.cpp: https://github.com/shogun-toolbox/shogun/commit/b78662acc2cdcae662cc30bb8bdab701be2a82db11:49
shogun-notifier-shogun: Merge pull request #1525 from tklein23/fix_sparse_templates11:49
shogun-notifier-shogun:11:49
shogun-notifier-shogun: Removing code duplication by proper templating&specialization.11:49
@HeikoSiglesiasg: not well presented why its useful11:49
@HeikoSiglesiasg: they got a point though, the most important experiments were in the rebuttal11:49
sonne|workHeikoS: will you go to nips nevertheless?11:49
thoralfsonne|work: With "C" I get strange compiler errors regading to templates - and the disappear when removing the C.11:50
@HeikoSsonne|work: yes I think, I will try to give a workshop talk and also this MLOSS thing11:50
thoralfsonne|work: Something within class_list.cpp11:50
@HeikoSwhen is wiking back=?11:50
@iglesiasgone week wedding + two weeks hangover :P11:50
@iglesiasgjust kidding11:50
sonne|workthoralf: yeah it assumes CMyClass is derived form CSGObject11:51
sonne|workHeikoS: so 2 workshop talks :)11:51
@HeikoSwell dont know whether this works, just trying11:51
besser82HeikoS: Hi! Is there any special benefit when compiling shugon with NLopt?11:53
thoralfsonne|work: It actually is.  But it's generating code without the needed <template> when calling the constructor.11:53
sonne|workthoralf: so these C prefixed classes will be serialized11:53
thoralf(I'm not quite sure, since the class_list.cpp is not always rebuilt)11:54
shogun-buildbotbuild #1607 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1607  blamelist: Soeren Sonnenburg <sonne@debian.org>12:02
@HeikoSbesser82: yes, we use that for GP model-selection12:03
@HeikoSwhich is crucial for GPs12:03
besser82HeikoS: thanks! What about ColPack and LaPack95?  Anything essential or important about them?  I'm asking because those would be need to packaged for Fedora, too....12:05
@HeikoSbesser82: ColPack is for graph colourings and is used by the GSoC project of lambday which involves sampling log-determinants of large, sparse matrices. It is essential for this part of the framework, but the framework itself is not as mainstream as GPs for example12:06
@HeikoSlapack is used in many places, so that should be in12:06
@HeikoScolpack is bundled by cmake since its also not a debian package12:06
besser82HeikoS: lapack is in avail. ;) But I'm asking specially about LaPack9512:07
besser82HeikoS: bundling / donwloads during build is not allowed for Fedora, so I need to prepare them seperately.12:08
@HeikoSbesser82: I see, ColPack would be good to have since the log-det project might be popular once done12:08
@HeikoSI have no idea about LaPack95 though12:08
besser82HeikoS: any idea who might have an idea?12:09
shogun-buildbotbuild #1608 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1608  blamelist: Thoralf Klein <thoralf.klein@zib.de>12:10
@HeikoSsonne|work: LaPack95, what is that used for12:10
@HeikoSbesser82: LAPACK95 -- Fortran95 interface to LAPACK12:11
@HeikoSI dont think there is any fortran code in shogun12:11
@HeikoScurrently searching for "fortran95" in all source files, lets see12:12
besser82HeikoS: I know about that ;) But cmake checks for this....12:12
@HeikoSbesser82: the only file where this is in is here12:13
@HeikoS# This module was modified by CGAL team:12:13
@HeikoS# - find libraries for a C++ compiler, instead of Fortran12:13
@HeikoS# - added LAPACK_INCLUDE_DIR, LAPACK_DEFINITIONS and LAPACK_LIBRARIES_DIR12:13
@HeikoS# - removed LAPACK95_LIBRARIES12:13
thoralfHeikoS: Is it possible to exclude a class from your clone_unittest?  (Or at least to limit the template classes it tries?)12:13
@HeikoSits in the FindLapack.cmake file12:13
@HeikoSthoralf: yes there is a blacklist option12:13
@HeikoSin the python script that generates them, should be three classes in there12:14
@HeikoSthoralf: why do you want to exclude?12:14
thoralfHeikoS: I'm using a sparse label class - labels are array subscripts.12:14
thoralfHeikoS: Does not make sense to use float.12:14
thoralffor example.12:14
@HeikoSthoralf: uh12:15
@HeikoSI dont know whether thats possible12:15
@HeikoSbut you can try :)12:15
thoralfHeikoS: Just exclude would be enough :)12:15
besser82HeikoS: thanks for the infos. Seems the "LAPACK95_FOUND=FALSE" is a bogus message from cmake then ;)12:26
@HeikoSbesser82: yep should be fine just ignoring it12:26
besser82HeikoS: since it finds clapack from ATLAS ;)12:27
@HeikoSok cool12:27
shogun-buildbotbuild #1690 of deb3 - modular_interfaces is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/169012:32
shogun-buildbotbuild #1387 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1387  blamelist: Soeren Sonnenburg <sonne@debian.org>12:41
shogun-buildbotbuild #1691 of deb3 - modular_interfaces is complete: Failure [failed install test python_modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1691  blamelist: Thoralf Klein <thoralf.klein@zib.de>12:50
sonne|workHeikoS: well lapack is fortran so shogun might use it12:54
besser82sonne|work: I explicitly asked for lapack95 ;) Because cmake tells me it's not found (non-fatal), but detects clapack from ATLAS....13:12
besser82sonne|work: so i'm wondering if lapack95 there is needed by sth. explicitly....13:12
shogun-buildbotbuild #1388 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1388  blamelist: Thoralf Klein <thoralf.klein@zib.de>13:25
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sonne|workbesser82: no atlas includes lapack and this and eigen3 is what you want13:43
sonne|workvan51: hey any news?13:43
van51sonne|work: hey13:44
van51sonne|work: yeah I have updated the PR and was waiting for travis13:44
besser82sonne|work: so atlas && eigen3 is sufficient?!?13:44
sonne|workvan51: I meant did you re-run the benchmark?13:44
van51sonne|work: yeah for 100k examples13:45
van51sonne|work: and the dot-variant was still faster13:45
van51sonne|work: I have those results under the benchmark code13:45
sonne|workbesser82: for numerical libs yes. I mean of course there are some parts that need more. E.g. glpk for 1-norm MKL and IIRC nlopt for some parts of GPs (right HeikoS?)13:45
sonne|workvan51: ahh ok nice - what did you do?13:45
@HeikoSnlopt has to be in for gps, yes13:46
van51sonne|work: https://github.com/van51/shogun/blob/c5d585c57f5789fc06596dbf0fab41fc69d5c905/benchmarks/rf_feats_benchmark.cpp13:46
besser82sonne|work: the glpk-thing is clear; my question was more about atlas && eigen3 is sufficient to "substitute" this obscure lapack9513:47
sonne|workvan51: how many CPUs do you have - looks like it paralleized very well (speedup > 8x)13:47
sonne|workbesser82: yes 110%13:47
van51sonne|work: I 'm using a server from uni with 8 cpus :)13:48
besser82sonne|work: ^^, thanks.13:48
sonne|workvan51: ahh so speedup is 7.9 only - my bad :)13:48
sonne|workbut still very good to know13:48
van51I'm going to have lunch now13:51
van51sonne|work: let me know if something is wrong :)13:51
sonne|workvan51: heh tell me what you did to make it work with arbitrary DF's13:51
sonne|workvan51: enjoy your meal13:51
van51sonne|work: well the place where it mattered what the underlying features were, was when we wanted to compute the dot product of w' * x14:19
van51sonne|work: so instead of getting the vector x through a get_feature_vector(idx) method and then computing the dot product14:19
van51sonne|work: I just did feats->dense_dot(i , w.vector, w.vlen)14:20
@iglesiasgsonne|work, ping14:20
@iglesiasgsonne|work, can I get kcachegrind in the fatbot pleease? :)14:21
@iglesiasgfor some reason valgrind breaks when I compile Shogun in Release and I profiling LMNN with the fatbot14:21
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shogun-notifier-shogun: jey1401 :develop * 359c1c4 / src/interfaces/r_static/RInterface.cpp: https://github.com/shogun-toolbox/shogun/commit/359c1c4ab32d6ac3a8d1c38617abb221cc57000415:10
shogun-notifier-shogun: Update RInterface : correction of 'number of arguments' bug15:10
shogun-notifier-shogun:15:10
shogun-notifier-shogun: Since R3.0 the number of arguments of External calls is checked for each call. sg has an unfixed number of argument. Fixing the number of arguments to -1 in the registration allows to disable that check.15:10
shogun-notifier-shogun: Soeren Sonnenburg :develop * 804d6c9 / src/interfaces/r_static/RInterface.cpp: https://github.com/shogun-toolbox/shogun/commit/804d6c92c3be45aa4ba78a26f57f313cc15cdef815:10
shogun-notifier-shogun: Merge pull request #1534 from jey1401/patch-115:10
shogun-notifier-shogun:15:10
shogun-notifier-shogun: Update RInterface : correction of 'number of arguments' bug15:10
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shogun-buildbotbuild #1609 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1609  blamelist: Soeren Sonnenburg <sonne@debian.org>15:28
thoralfsonne|work: Something went wrong when complex64_t was introduced.15:38
thoralfsonne|work: When calling CMath::max() I'm getting errors related to complex64_t15:38
sonne|workthoralf: well what is max for a complex nr?15:39
thoralfshogun-buildbot: I need to specify CMath::max<type>15:39
thoralfsonne|work: CMath::max(int32_t, int32_t);15:40
thoralfcannot convert 'complex64_t {aka std::complex<double>}' to 'shogun::int32_t {aka short int}' in assignment15:41
thoralfI'm providing integers, but it chooses the wrong template.15:41
sonne|workthoralf: weird15:42
thoralfWhen removing this max-complex macro, then inference works fine (for the other types).15:43
thoralfI think the problem is, that you're overloading max instead of specializing it.15:43
shogun-notifier-shogun: Fernando Iglesias :develop * 75aff69 / src/shogun/structure/DualLibQPBMSOSVM.cpp: https://github.com/shogun-toolbox/shogun/commit/75aff69ab83fcb9947a62e11d85d1153a14d352715:43
shogun-notifier-shogun: Minor warning fix in the structured learning framework.15:43
shogun-notifier-shogun: Comparison between signed and unsigned integers.15:43
shogun-notifier-shogun: Fernando Iglesias :develop * f40a66a / src/shogun/structure/DualLibQPBMSOSVM.cpp: https://github.com/shogun-toolbox/shogun/commit/f40a66aeff25ca3607b2d1a6bfbfbdf5ae9de9a615:43
shogun-notifier-shogun: Merge pull request #1535 from iglesias/feature/fix_warning15:43
shogun-notifier-shogun:15:43
shogun-notifier-shogun: Minor warning fix in the structured learning framework.15:43
sonne|workthoralf: so why not overload it all the time then?15:45
sonne|workthoralf: hmmh or template the complex thing15:47
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shogun-buildbotbuild #1610 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1610  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>15:55
shogun-buildbotbuild #1611 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1611  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>16:00
shogun-buildbotbuild #1612 of bsd1 - libshogun is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1612  blamelist: jey1401 <jey1401@gmail.com>16:02
shogun-buildbotbuild #1692 of deb3 - modular_interfaces is complete: Failure [failed install test python_modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1692  blamelist: Soeren Sonnenburg <sonne@debian.org>16:04
shogun-buildbotbuild #1389 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1389  blamelist: Soeren Sonnenburg <sonne@debian.org>16:04
thoralfsonne|work: I tried to fix it without templating the whole class, but it didn't work out.16:18
thoralfsonne|work: Some versions didn't compile, others broke everything. ;)16:18
thoralfsonne|work: Here is what I tried - maybe you see whats wrong: https://github.com/tklein23/shogun/compare/cmath_max_complex64_t16:21
thoralfI think I'll stop trying, since it seems to be more complex then just fix some declarations.16:22
shogun-buildbotbuild #1693 of deb3 - modular_interfaces is complete: Failure [failed install test libshogun test python_modular test java_modular test csharp_modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1693  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>16:26
shogun-buildbotbuild #1390 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1390  blamelist: jey1401 <jey1401@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>16:48
shogun-buildbotbuild #1694 of deb3 - modular_interfaces is complete: Failure [failed install test python_modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1694  blamelist: jey1401 <jey1401@gmail.com>16:52
shogun-notifier-shogun: van51 :develop * 2fae496 / / (6 files): https://github.com/shogun-toolbox/shogun/commit/2fae496edc1df5c9d00423f44057e85dd0ca5a0317:11
shogun-notifier-shogun: Random Fourier Features17:11
shogun-notifier-shogun: Soeren Sonnenburg :develop * a8358cc / / (6 files): https://github.com/shogun-toolbox/shogun/commit/a8358cc7db1a9f879c9adacf05b3de2cf31edf7917:11
shogun-notifier-shogun: Merge pull request #1466 from van51/feature/randomfeat17:11
shogun-notifier-shogun:17:11
shogun-notifier-shogun: Random Fourier Features17:11
shogun-notifier-shogun: Kevin :develop * 7c532d1 / doc/ipython-notebooks/ica/ecg_sep.ipynb: https://github.com/shogun-toolbox/shogun/commit/7c532d1484bea275226358378fd825a791abc75117:12
shogun-notifier-shogun: updated ICA ecg notebook17:12
shogun-notifier-shogun: Soeren Sonnenburg :develop * 2ac823d / doc/ipython-notebooks/ica/ecg_sep.ipynb: https://github.com/shogun-toolbox/shogun/commit/2ac823dcc3a481063545da16264d8d33d49eb0d917:12
shogun-notifier-shogun: Merge pull request #1532 from pickle27/develop17:12
shogun-notifier-shogun:17:12
shogun-notifier-shogun: updated ICA ecg notebook17:12
shogun-notifier-shogun: Kevin :develop * f713eec / / (29 files): https://github.com/shogun-toolbox/shogun/commit/f713eec5465a000e1d452d1dea5dfed2a940e78b17:14
shogun-notifier-shogun: updated ruby modular to use nmatrix, initial commit17:14
shogun-notifier-shogun: Soeren Sonnenburg :develop * 94c1d75 / / (29 files): https://github.com/shogun-toolbox/shogun/commit/94c1d75fb75820e45565afe236deb80c6acbdf7b17:14
shogun-notifier-shogun: Merge pull request #1516 from pickle27/nmatrix17:14
shogun-notifier-shogun:17:14
shogun-notifier-shogun: updated ruby modular to use nmatrix17:14
shogun-buildbotbuild #1695 of deb3 - modular_interfaces is complete: Failure [failed compile libshogun]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1695  blamelist: Soeren Sonnenburg <sonne@debian.org>, van51 <vangelis_51@hotmail.com>17:20
shogun-buildbotbuild #1613 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1613  blamelist: Soeren Sonnenburg <sonne@debian.org>, van51 <vangelis_51@hotmail.com>17:22
shogun-buildbotbuild #1696 of deb3 - modular_interfaces is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1696  blamelist: Soeren Sonnenburg <sonne@debian.org>, Kevin <kevinhughes27@gmail.com>17:28
shogun-buildbotbuild #1614 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1614  blamelist: Soeren Sonnenburg <sonne@debian.org>, Kevin <kevinhughes27@gmail.com>17:33
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@HeikoSiglesiasg: do you know how to specify my own swig version to shogun?17:49
@HeikoSsonne|work, sonney2k ^17:49
@iglesiasgHeikoS, -D SWIG_EXECUTABLE=/usr/bin/swig2.0, for instance17:50
@iglesiasgHeikoS, ccmake helps to find these options ;)17:50
@iglesiasgI just did ccmake .. from the build directory17:51
@HeikoSiglesiasg: thanks!17:51
@HeikoSiglesiasg: not installed on this cluster I am trying :)17:51
@iglesiasgHeikoS, welcome! :)17:51
@iglesiasgHeikoS, cool, are you going to do something large scale in a cluster?17:51
@HeikoSiglesiasg: yes17:51
@HeikoSat least I am trying17:51
@HeikoSgoing to allocate a few thousand nodes17:51
@HeikoSand test my PBS computation engine17:52
@HeikoSwhich implements lambdays interface using batch clusters17:52
@HeikoSand I need this for my ozone experiements17:52
@HeikoSwhich I have to present next week ;)17:52
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shogun-buildbotbuild #1391 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1391  blamelist: Soeren Sonnenburg <sonne@debian.org>, van51 <vangelis_51@hotmail.com>18:00
shogun-buildbotbuild #1615 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1615  blamelist: Kevin <kevinhughes27@gmail.com>18:08
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shogun-buildbotbuild #1697 of deb3 - modular_interfaces is complete: Failure [failed install test python_modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1697  blamelist: Kevin <kevinhughes27@gmail.com>18:43
shogun-buildbotbuild #1392 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1392  blamelist: Soeren Sonnenburg <sonne@debian.org>, Kevin <kevinhughes27@gmail.com>18:43
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1102079919:09
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sonne|osxvan51: for some reason github didn't mark your PR updated20:03
sonne|osxtook me a while to figure out that you actually added a test20:03
van51sonne|osx: hmm was that making a difference?20:04
sonne|osxvan51: I was waiting for you to update the PR but only realized that you did today afternoon20:05
van51sonne|osx: ah now I understand.. yea I don't think it marks it if you just update20:07
van51sonne|osx: I should have commented afterwards like iglesiasg has suggested at another time20:07
@iglesiasgaham! So it is not a faulty GitHub configuration of mine20:08
van51iglesiasg: I'd say not, but I'm not that familiar :p20:08
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sonne|osxgrpmf20:12
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sonne|osxvan51: please fix the warnings20:18
sonne|osxhttp://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1697/steps/compile%20python_modular/logs/warnings%20%2886%2920:18
sonne|osx^ van51 these ones20:18
sonne|osxnot all are yours of course but you will recognize the classes that are :)20:19
van51sonne|osx: ah yeah! sure, I'm on it ;)20:19
* sonne|osx off20:19
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shogun-buildbotbuild #87 of osx1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/87  blamelist: Soeren Sonnenburg <sonne@debian.org>, Thoralf Klein <thoralf.klein@zib.de>, jey1401 <jey1401@gmail.com>, Kevin <kevinhughes27@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>, van5120:46
shogun-buildbot<vangelis_51@hotmail.com>20:46
shogun-buildbotbuild #1698 of deb3 - modular_interfaces is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/169820:59
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@sonney2kpickle27, hey...21:00
pickle27sonney2k, hey21:00
@sonney2kI wish wiking was here to help with this21:00
@sonney2kpickle27, the nmatrix install instructions are pretty clear but hmhh21:01
pickle27sonney2k, oh for the build bot21:01
pickle27sonney2k, so we have a ruby modular build bot? I wasn't sure21:01
@sonney2kpickle27, sure21:01
@sonney2kpickle27, we are getting this far now http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/169821:02
@sonney2kfail on configure21:02
pickle27sonney2k, how did you put nmatrix on the bot?21:04
@sonney2kpickle27, not at all21:09
@sonney2kpickle27, question is whether we should implement that in cmake downloading rather21:09
pickle27sonney2k, ah i see, that is a wiking question21:10
pickle27I think we should leave it, I mean we don't install NumPy if they are missing it do we?21:10
@sonney2kpickle27, no but we install json-c, eigen3 etc21:13
@sonney2kbut yes it would be an option to not do it21:13
@sonney2kOMFG21:13
@sonney2kI just realize libshogun.so* is 250MB in size now?21:13
@sonney2kwtf happened21:13
@sonney2kIIRC we were at two digits before gsoc21:14
pickle27sonney2k, no idea21:14
pickle27i didn't do it :021:14
@sonney2kpickle27, that is what you say :D21:17
pickle27haha21:17
pickle27alright I have to head out now, looking at apartments today21:18
* sonney2k tries to compile shogun 2.1 for reference21:18
pickle27Im going to read the logs for the result, Im curious too21:19
@sonney2kit will take just 1 min :D21:20
@sonney2k44M!21:21
@sonney2kcompile time with cold caches 1m1721:21
@sonney2kstripped 12M21:22
pickle27woah21:23
pickle27compile times have gotten pretty long21:23
@sonney2kstripped libshogun now is 20M21:24
@sonney2kpickle27, I guess due to using more templates than before. maybe eigen3 not sure21:26
@sonney2kwe will see21:26
@sonney2kalright on may 13 everything was still ok21:27
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@sonney2kfoulwall, around?21:29
@sonney2khmmhh jul18 had already 210MB21:35
@sonney2kcompile time w/ ccache up to 2:2021:36
@sonney2kJun1 138MB21:44
@sonney2kMay 19 135MB21:49
@sonney2kMay 14 128MB21:53
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@sonney2kiglesiasg, did you know that our libshogun.so is now 250MB in size?22:27
@iglesiasgsonney2k, no, I didn't notice it actually22:27
@iglesiasgsonney2k, is that good or bad? :)22:27
@sonney2kiglesiasg, well we had sth like 4422:28
@sonney2kso well that explains compile time and everthing22:28
@iglesiasgI see22:29
@iglesiasgsonney2k, do you think we should try to reduce it somehow?22:29
@iglesiasgsonney2k, btw since I am using my office computer basically for everything, I don't notice any more that it takes some time to compile22:29
@iglesiasgit is so fast22:29
@sonney2kheh22:30
@sonney2kno idea22:30
@sonney2kI don't know what I measured22:30
@sonney2kbut now I have 122 MB for shogun 2.122:30
@sonney2kI guess we need some shell script that tests all versions22:32
@sonney2kalrighty script is running22:43
@iglesiasgsonney2k, checking dimension of libshogun.so in different versions?22:50
@sonney2kiglesiasg, yeah every version is now being built and size determined22:53
@sonney2kshocking how many versions don't build at all22:53
@iglesiasglol22:53
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@sonney2k98380b322004796b058d74d6c24b9f0dad1bff80 251506947shogun/libshogun.so.14.022:54
@sonney2k<commit> <size in byte> <libshogun name>22:54
@sonney2kiglesiasg, I think we should have a plot of this and update it done by our buildbot22:55
@iglesiasgsounds interesting23:01
@iglesiasgsonney2k, so does the size increase commit by commit?23:01
@sonney2kiglesiasg, I am doing the other way round23:16
@sonney2kce4ee057ce3980725275ced9416c889f5cdf8b98 250093795shogun/libshogun.so.14.023:16
@sonney2kit will take all night and maybe tomorrow even23:16
@iglesiasgI see23:20
--- Log closed Fri Sep 06 00:00:47 2013