Open in new window / Try shogun cloud
--- Log opened Sat Sep 28 00:00:18 2013
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van51sonney2k: made a PR about that : https://github.com/shogun-toolbox/shogun/pull/168801:29
van51sonney2k: I still have trouble evaluating.. after the svm is trained it can't convert 10k examples01:30
van51sonney2k: how had you managed to test it on 100k examples? were you loading them by chunks or something? :p01:31
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shogun-buildbotbuild #469 of nightly_all is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_all/builds/46903:08
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wikingsonne|osx: could u please run this on 7nn as root: chown -R buildbot:buildbot /home/shogun/static/notebook/06:56
pickle27data repo is being weird, I've pushed but github won't recognize, I'll make that half of the PR as soon as it catches up08:06
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shogun-notifier-shogun-data: Kevin :master * 68ca7a4 / ica/lena.jpg,ica/monalisa.jpg: https://github.com/shogun-toolbox/shogun-data/commit/68ca7a4a034c09f1099a2cbecf134015add3ac9c12:19
shogun-notifier-shogun-data: added data for image ica notebook12:19
shogun-notifier-shogun-data: Fernando Iglesias :master * ff28d92 / ica/lena.jpg,ica/monalisa.jpg: https://github.com/shogun-toolbox/shogun-data/commit/ff28d92551d66a14679812d9028c812b777f6fc312:19
shogun-notifier-shogun-data: Merge pull request #26 from pickle27/master12:19
shogun-notifier-shogun-data:12:19
shogun-notifier-shogun-data: added data for image ica notebook12:19
@sonney2kwiking, why that you use the buildbot to copy things over or what?13:09
@sonney2kwiking, I guess so -> done13:10
@sonney2kshogun-buildbot: force build --branch=develop 'nightly_default'13:17
shogun-buildbotbuild #547 forced13:17
shogun-buildbotI'll give a shout when the build finishes13:17
shogun-notifier-shogun: Kevin :develop * 5b3ead2 / doc/ipython-notebooks/ica/ (4 files): https://github.com/shogun-toolbox/shogun/commit/5b3ead225bf54e032ea43b19d9aafa46e683aab013:20
shogun-notifier-shogun: added a new ica notebook using image data, fixed typo in other notebooks13:20
shogun-notifier-shogun: Soeren Sonnenburg :develop * e8d840c / doc/ipython-notebooks/ica/ (4 files): https://github.com/shogun-toolbox/shogun/commit/e8d840c5026a34034da618d86928c39b72491a1613:20
shogun-notifier-shogun: Merge pull request #1689 from pickle27/develop13:20
shogun-notifier-shogun:13:20
shogun-notifier-shogun: added a new ica notebook using image data, fixed typo in other notebooks13:20
shogun-notifier-shogun: lambday :develop * 595e6cc / tests/unit/mathematics/linalg/LogDetEstimator_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/595e6ccb4e45ee3bfb3e715755141041e696693d13:20
shogun-notifier-shogun: added set seed for failing unit-test13:20
shogun-notifier-shogun: Soeren Sonnenburg :develop * 84ca2aa / tests/unit/mathematics/linalg/LogDetEstimator_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/84ca2aa5e986c1cb5c10a6893d2f9c838eec7da713:20
shogun-notifier-shogun: Merge pull request #1690 from lambday/develop13:20
shogun-notifier-shogun:13:20
shogun-notifier-shogun: added set seed for failing unit-test13:20
shogun-buildbotHey! build nightly_default #547 is complete: Success [build successful]13:27
shogun-buildbotBuild details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/54713:27
shogun-buildbotbuild #203 of FC19 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20libshogun/builds/203  blamelist: Soeren Sonnenburg <sonne@debian.org>13:39
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shogun-buildbotbuild #59 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/59  blamelist: lambday <heavensdevil6909@gmail.com>, Kevin <kevinhughes27@gmail.com>14:47
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1189895615:05
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shogun-buildbotbuild #60 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/60  blamelist: Soeren Sonnenburg <sonne@debian.org>15:28
wikingsonney2k: thnx15:30
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shogun-buildbotbuild #42 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/42  blamelist: lambday <heavensdevil6909@gmail.com>, Kevin <kevinhughes27@gmail.com>, Soeren Sonnenburg <sonne@debian.org>15:51
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gsomixgood evening17:30
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hushelliglesiasg: hey!17:49
hushelliglesiasg: saw you comments17:50
@iglesiasghushell, hi there17:50
hushelliglesiasg: so you prefer ref and unref?17:50
hushellhushell: well, you are right, we should keep model away from features and labels somehow17:51
hushelliglesiasg: sorry, why I say to myself :p17:51
@iglesiasghushell, I think that method is sort of weird because it is a getter for a thing that is not an attribute17:51
@iglesiasghushell, and there is also this fact of model separated from features and labels17:52
@iglesiasghushell, but as I said, I think we are spending more time than required for this detail so use your best judgement about it to take the decision :)17:52
hushelliglesiasg: well, I'd like to follow your suggestion17:53
hushelliglesiasg: let me change this function and commit again17:54
@iglesiasghushell, please rebase upstream develop too17:54
hushelliglesiasg: I have correct my notebook as well in terms of your review :) I'll commit after this PR17:54
hushelliglesiasg: okay17:55
@iglesiasghushell, also, are Patrick's comments already addressed?17:55
@iglesiasgnot for the notebook, but the SGD17:55
hushelliglesiasg: most of them, but the SOSVMHelper class is a general one, so I'd keep the dual functions for BCFW17:56
@iglesiasghushell, ok17:56
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AndChat49209.20:08
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@sonney2khey gsomix!20:39
gsomixsonney2k, hey.20:39
@sonney2kgsomix, do you have some time to try out the matlab stuff?20:40
gsomixsonney2k, yep. looking library right now20:41
@sonney2kgsomix, cool!20:42
@sonney2kwiking, why do all notebooks fail again :(20:42
@sonney2kgsomix, when the lib works you should do a CMatlabFile.h the same way the HDF5File is done20:43
gsomixsonney2k, ok.20:44
@sonney2kgsomix, to be clear - .mat files can contain arbitrarily many variables20:44
@sonney2kgsomix, so with shogun one could just load one - and you just specify the name20:44
@sonney2ke.g. CMatlabFile(char* fname, char rw='r', const char* name);20:45
@sonney2kgsomix, btw the same thing would be doable with .csv files - I mean we could allow loading just certain columns20:45
@sonney2kanyways have a look first :)20:46
@sonney2kwiking, trying to fix ...20:47
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gsomixsonney2k, ok. it seems I need little rewrite this library.20:53
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@sonney2kgsomix, what can it do so far?21:07
@sonney2kgsomix, and which file are you looking at? wasn't it just 1 file?21:08
gsomixsonney2k, MatlabIO.{h,c}pp, MatlabIOContainer.hpp21:09
@sonney2kgsomix, link please21:09
gsomixfreakin' Chrome!21:10
gsomixjust a moment21:10
gsomixsonney2k, https://github.com/hbristow/cvmatio/blob/master/src/MatlabIO.cpp21:12
gsomixunexpected crash21:13
gsomixhttps://github.com/hbristow/cvmatio/tree/master/include21:13
gsomixsonney2k, as you see this library uses boost::any and cv::Mat21:13
gsomixsonney2k, so there are some methods like MatlabIO::constructMatrix for data types.21:16
@sonney2kgsomix, I see them21:17
@sonney2kgsomix, I didnt' see yet where it uses cv's mat21:17
@sonney2kgsomix, any idea what boost any is doing?21:17
@sonney2kseems like the only 'heavy' dependency21:18
gsomixsonney2k, lisitsyn expain better, than me about any, huh :)21:18
gsomixI just have consulted with him21:18
gsomix*explain21:18
lisitsynwell I implemented any by myself once21:18
@sonney2klisitsyn, what is it?21:19
gsomixsonney2k, about cs::Mat. look at  MatlabIO::constructMatrix, line 35221:19
lisitsynsonney2k: value with arbitrary type21:19
gsomix*cv::Mat21:19
lisitsynsonney2k: it can be casted back with any_cast21:21
lisitsynint a = 3;21:21
lisitsynany aa = a;21:21
lisitsynint b = any_cast<int>(aa);21:21
@sonney2klisitsyn, sth like void ptr underneath?21:21
lisitsynyes basically void ptr21:21
lisitsynsonney2k: it holds type though, that's the essential trick here21:22
gsomixsonney2k, http://docs.opencv.org/modules/core/doc/basic_structures.html?highlight=mat#Mat21:22
@sonney2kgsomix, cv::Mat seams easy to replace21:25
@sonney2knot boost::any21:25
gsomixsonney2k, yep.21:25
@sonney2khaving a dependency on boost is a massive thing21:26
@sonney2kso if possible try to do w/o21:26
gsomixsonney2k, I can redesign methods of MatlabIOContainer and MatlabIO.21:26
gsomixjust need figure out how :)21:26
@sonney2kgsomix, it seems like any is just needed in the container21:26
@sonney2knowhere else21:26
gsomixsonney2k, indeed21:27
@sonney2kgsomix, the way I would do it:21:27
@sonney2k1) fork cvmatio21:27
@sonney2k2) make it work w/o boost21:27
lisitsynI have small any around21:27
@sonney2kyeah use lisitsyn's if you want21:28
@sonney2k3) then replace cv::mat with shogun data types where needed and link (externally against libshogun) for that21:28
lisitsynnot mine though ;)21:28
@sonney2k4) put the required code under shogun tree in external21:29
@sonney2klisitsyn, license?21:29
lisitsynboost 1.021:29
@sonney2k5) write CMatlabFile21:29
@sonney2klisitsyn, ok21:29
@sonney2kgsomix, does that make sense?21:29
gsomixsonney2k, yes.21:29
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shogun-notifier-shogun: Fernando Iglesias :develop * 9affe28 / doc/ipython-notebooks/metric/LMNN.ipynb: https://github.com/shogun-toolbox/shogun/commit/9affe2834ffb235ed2c4de7d8b0d4fd83358c3cf21:32
shogun-notifier-shogun: Several minor improvements in the LMNN notebook.21:32
shogun-notifier-shogun: Links to Doxygen, references section, spell check.21:32
shogun-notifier-shogun: Soeren Sonnenburg :develop * 70c1f16 / doc/ipython-notebooks/metric/LMNN.ipynb: https://github.com/shogun-toolbox/shogun/commit/70c1f16eea28c9567ee33b4cbd27443e07bd696121:32
shogun-notifier-shogun: Merge pull request #1691 from iglesias/feature/lmnn21:32
shogun-notifier-shogun:21:32
shogun-notifier-shogun: Several minor improvements in the LMNN notebook.21:32
lisitsyngsomix: https://raw.github.com/lisitsyn/tapkee/e0e694d38cabf47c258ed898bd8fd575eb623e2e/include/utils/any.hpp21:32
lisitsynthat's it21:33
gsomixlisitsyn, ok, thanks.21:33
shogun-buildbotbuild #204 of FC19 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20libshogun/builds/20421:46
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@iglesiasghushell, I am going to check the new updates to the PR right now!22:06
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@sonney2kshogun-buildbot: force build --branch=develop 'nightly_default'22:22
shogun-buildbotThe build has been queued, I'll give a shout when it starts22:22
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shogun-buildbotbuild #40 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/40  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>22:31
shogun-buildbotbuild #43 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/43  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>22:46
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1190974122:47
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@sonney2kshogun-buildbot: force build --branch=develop 'nightly_default'23:05
shogun-buildbotThe build has been queued, I'll give a shout when it starts23:05
shogun-buildbotbuild #1551 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1551  blamelist: lambday <heavensdevil6909@gmail.com>, Soeren Sonnenburg <sonne@debian.org>, Evgeniy Andreev <gsomix@gmail.com>, Kevin <kevinhughes27@gmail.com>, Viktor Gal <viktor.gal@maeth.com>, Heiko23:14
shogun-buildbotStrathmann <heiko.strathmann@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>, Roman Votyakov <votjakovr@gmail.com>23:14
gsomixgood night people23:15
shogun-buildbotbuild #61 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/61  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>23:29
@sonney2kgsomix, night!23:33
@sonney2kwiking, I now know what is failing on cyg1 - it is sse2 not being available but called in the RNG23:34
shogun-buildbotbuild #548 forced23:37
shogun-buildbotI'll give a shout when the build finishes23:37
shogun-buildbotbuild #41 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/41  blamelist: Soeren Sonnenburg <sonne@debian.org>23:40
shogun-buildbotbuild #44 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/44  blamelist: Soeren Sonnenburg <sonne@debian.org>23:54
--- Log closed Sun Sep 29 00:00:19 2013