Open in new window / Try shogun cloud
--- Log opened Wed May 18 00:00:01 2016
shogun-buildbotbuild #0 of clang - thread analysis is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang%20-%20thread%20analysis/builds/0  blamelist: Viktor Gal <viktor.gal@maeth.com>03:07
shogun-buildbotbuild #0 of clang - undefined behaviour analysis is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang%20-%20undefined%20behaviour%20analysis/builds/0  blamelist: Viktor Gal <viktor.gal@maeth.com>03:07
shogun-buildbotbuild #0 of memleak - valgrind is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/memleak%20-%20valgrind/builds/0  blamelist: Viktor Gal <viktor.gal@maeth.com>03:20
shogun-buildbotbuild #1005 of nightly_all is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_all/builds/1005  blamelist: Viktor Gal <viktor.gal@maeth.com>03:31
shogun-buildbotbuild #1004 of nightly_none is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_none/builds/1004  blamelist: Viktor Gal <viktor.gal@maeth.com>03:47
shogun-buildbotbuild #1133 of nightly_default is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/1133  blamelist: Viktor Gal <viktor.gal@maeth.com>04:08
@wikingshogun-buildbot: force build --branch=develop 'memleak - valgrind'05:06
shogun-buildbotThe build has been queued, I'll give a shout when it starts05:06
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shogun-buildbotbuild #1 forced05:23
shogun-buildbotI'll give a shout when the build finishes05:23
shogun-buildbotbuild #3 of xenial - libshogun is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/xenial%20-%20libshogun/builds/3  blamelist: Viktor Gal <viktor.gal@maeth.com>05:30
shogun-buildbotbuild #2867 of bsd1 - libshogun is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/2867  blamelist: Viktor Gal <viktor.gal@maeth.com>05:32
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shogun-buildbotbuild #1 of memleak - valgrind is complete: Failure [failed memory check]  Build details are at http://buildbot.shogun-toolbox.org/builders/memleak%20-%20valgrind/builds/108:57
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shogun-buildbotbuild #2868 of bsd1 - libshogun is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/2868  blamelist: Viktor Gal <viktor.gal@maeth.com>12:32
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shogun-buildbotbuild #4 of xenial - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/xenial%20-%20libshogun/builds/4  blamelist: Viktor Gal <viktor.gal@maeth.com>13:02
@wikingshogun-buildbot: force build --branch=develop 'clang - thread analysis'13:03
shogun-buildbotbuild #1 forced13:03
shogun-buildbotI'll give a shout when the build finishes13:03
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shogun-buildbotbuild #1 of clang - thread analysis is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang%20-%20thread%20analysis/builds/113:17
lisitsynsanuj: hey there13:17
sanujlisitsyn, hi13:18
sanujssup13:18
lisitsynany news? :)13:19
sanujnothing new :(13:19
sanuji was trying to train a CNN.....will start working on plugins in a while13:20
lisitsynok I see13:20
sanujlisitsyn, you interested in quantum computers?13:29
sanuj:)13:29
lisitsynsanuj: not really :D13:33
sanujokay :)13:33
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sanujlisitsyn, why have you defined LibraryHandle in cpp and not in hpp13:54
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@wikingleagoetz: wazzawazza14:52
@wikingleagoetz: we should create some fancy queries for github14:52
@wikingto monitor the health of our students ;)14:53
@wikingsubmitted + merged prs14:53
sanuj:D14:53
sanujwiking, mine https://github.com/shogun-toolbox/shogun/wiki/GSoC%202016%20project%20%20%20New%20Parameter%20Framework%20and%20Plugin%20Architecture14:56
@wikingsanuj: ?15:01
@wikingok 50% of the 4.2.0 release tickets are closed/fixed :)15:02
leagoetzwiking: hello15:02
sanujwiking, stuff that i'm supposed to complete before coding period starts15:02
sanujwhich reminds me.....15:03
leagoetzI kind of like the idea but we don't really want to micromanage them ... self-initiative is better15:03
sanujwiking, lisitsyn i need to plan a precise timeline for my project15:03
leagoetzsanuj: aha, someone actually reads my emails :)15:04
sanujleagoetz, :D15:04
lisitsynok yeah15:04
@wikingleagoetz: is Heiko or Rahul around you?15:05
@wikingif so plz kick their chair and tell them to respond to my pings15:05
sanujwe have a shogun club brewing in UCL15:05
sanujhaha15:05
leagoetzwiking: I think they're in a talk (just met them for lunch, haha)15:05
leagoetzthat said, probably means Heiko has time now ;P15:05
@wikingleagoetz: ok so tell him to ping merge and reply15:06
@wiking:>15:06
@wikingthnx15:06
leagoetzdone15:08
@wikingthnx thnx15:09
shogun-buildbotbuild #5 of xenial - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/xenial%20-%20libshogun/builds/5  blamelist: Viktor Gal <viktor.gal@maeth.com>15:11
lisitsynwiking: all aws mails still go to my spam folder15:13
@wikinglisitsyn: yeeeeeeeeeeep15:13
shogun-buildbotbuild #2869 of bsd1 - libshogun is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/2869  blamelist: Viktor Gal <viktor.gal@maeth.com>15:14
lisitsynwiking: you suffer from that too?15:14
@wikingyep15:14
@wiking:)15:14
lisitsyngood15:14
lisitsyn:D15:14
lisitsynwiking: but checking spam as a regular folder of your mail15:14
lisitsynis like 80s15:14
lisitsynhow can that be real15:14
@wikinggmail (c)15:15
@wikingbbl15:16
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@HeikoSwiking: jo15:30
@HeikoSmy chair apparently was kicked ;)15:31
@HeikoSleagoetz is quite violent15:31
sanujlol15:33
sanujli15:34
sanujlisitsyn,15:34
sanujwhat's this15:34
sanujtemplate <typename T>15:34
sanujT call(const std::string& name)15:34
sanuj{15:34
sanujT (*fm)();15:34
sanuj*(void**)(&fm) = dlsym(handle, name.c_str());15:34
sanujif (!fm)15:34
sanujthrow std::logic_error("Haven't found method " + name);15:34
sanujreturn fm();15:34
sanuj}15:34
sanujlisitsyn, dlsym gives pointer to name in the loaded plugin lib?15:35
lisitsynpointer to function15:37
sanujyeah15:37
lisitsynsanuj: it calls it then15:38
sanujlisitsyn, why void**15:38
lisitsynsanuj: well that's how dlsym works15:39
sanujoh15:39
sanujreturns void*15:39
sanuji see15:39
@HeikoSlisitsyn:  jojo15:54
@HeikoSlisitsyn: did you see rahuls email on openmp?15:54
@HeikoSany ideas?15:55
sanujHeikoS, what are you guys upto?15:55
@HeikoSsanuj: hi there15:55
sanujhello :)15:55
@HeikoSthere is issues with eigen3 inside openmp loops15:55
@HeikoSsanuj: how is the planning going?15:56
@HeikoSall ready to get coding?15:56
sanujyep15:56
sanujswig interface is working for my tags prototype15:56
sanujplaying with plugins now15:56
@HeikoSgreat15:56
sanuj:D15:56
@HeikoShow do you register parameters in there?15:56
sanuji save it in an unordered_map15:57
sanuji have a draft15:57
@HeikoSsanuj: very excited to see this in action, recently started using shogun for a research project and cant wait to only compile my own plugin during development15:57
@HeikoSsanuj: cool!15:57
sanujhttps://gist.github.com/sanuj/3a343c8a31c4e9a4c65715:57
@HeikoSsanuj: how do you represent data type etc?15:57
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shogun-buildbotbuild #2870 of bsd1 - libshogun is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/2870  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>15:58
@HeikoSsanuj: this prototype is for simple parameters15:58
@HeikoShow will you do it for arrays?15:58
@HeikoSbtw you should talk to OXPHOS as well for her ersialization15:58
@HeikoSwhich is based on smart pointers15:58
sanujoh15:59
sanujhaven't thought about arrays15:59
sanujshould ask lisitsyn about that15:59
lisitsynyes15:59
lisitsynwhat15:59
lisitsynHeikoS: I have15:59
lisitsynlet me check it again15:59
lisitsyna bit later15:59
lisitsynwhat's about arrays?15:59
@HeikoSsanuj: SGVector, SGMAtrix, SGString, SGSparseVector15:59
lisitsynI see no difference15:59
sanujyeah15:59
lisitsynbut yes15:59
shogun-buildbotbuild #6 of xenial - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/xenial%20-%20libshogun/builds/6  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>15:59
lisitsynplease add it15:59
sanujit should work for objects also15:59
lisitsynjust export a few more types15:59
sanuji'll add15:59
@HeikoSsanuj: cool16:00
@HeikoSwould be great to get OXPHOS ceral demo working within this16:00
@HeikoScan you push her a bit to do that with you prototype?16:00
sanujHeikoS, i'll get in touch with OXPHOS16:00
sanujwhen she is here16:00
@HeikoSsanuj: can we have obtain_from_generic for every class using your framewokr btw?16:00
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sanujwhats obtain_from_generic16:01
@HeikoSusing your as<T>16:01
sanujyes16:01
@HeikoSthink you have a base class that has a method16:01
sanuji need to add it in the draft16:01
@HeikoSCKernel* CBase::learn_kernel16:01
sanujits working in my repo16:01
@HeikoSand then it retunrs a GaussianKernel16:01
@HeikoSin python16:01
@HeikoSthat will be under CKernel interface16:01
@HeikoSso need to "cast"16:02
@HeikoSCGaussianKernel::obtain_from_generic(ckernel_instance)16:02
@HeikoSwhich gives an object under CGaussianKernel interface (if possible)16:02
@HeikoSsee what I mean?16:02
@HeikoScheck CGaussianKernel for example16:03
@HeikoSthen you see16:03
@HeikoSit is a cast like operation16:03
@HeikoSbut it works from SWIG16:03
sanujHeikoS,  obj.get("num").asInt()16:03
sanuj^ it's working16:03
sanuji haven't added it to my draft yet16:03
@HeikoSbase.get("learnt_kernel").asObject("CGaussianKernel")16:04
@HeikoS?16:04
sanujshould work16:04
@HeikoScool, yeah add it, would be curious to see16:04
@HeikoSwould be good to add an example to your swig code for that16:04
sanujonly have swig bindings for asInt asFloat and asString currently16:04
@HeikoSI see16:05
@HeikoSwould be cool to add then :)16:05
sanujHeikoS, yes :)16:05
sanujHeikoS, i'm trying to understand the plugin part in lisitsyn's aer16:05
@HeikoSI see16:05
lisitsynNO16:05
lisitsynbase.get("learnt_kernel").asObject("CGaussianKernel")16:05
lisitsynnot possible16:05
sanujoh16:05
@HeikoSlisitsyn: can we ge tit?16:06
lisitsynbase.get("learnt_kernel").asKernel()16:06
lisitsynthis way16:06
lisitsynno cgaussiankernel16:06
@HeikoSwhat does this return?16:06
@HeikoSwhich interface when I do from Python?16:06
@HeikoSlisitsyn: when are you coming to London?16:06
@HeikoSlisitsyn: whats with the website16:06
@HeikoS>:-D16:06
lisitsynHeikoS: asKernel returns CKernel16:06
lisitsynHeikoS: you use CKernel interface16:07
lisitsynHeikoS: not sure yet16:07
lisitsynHeikoS: out of time, trying to get some16:07
@HeikoSlisitsyn: but how to get CGaussianKernel?16:07
@HeikoSlisitsyn: no worries16:07
lisitsynHeikoS: not possible16:07
@HeikoSjoking16:07
@HeikoSlisitsyn: but how to we mimic the obtain_From_generic thne?16:07
lisitsynyou can't operate on cgaussiankernel16:07
lisitsynthere is no such thing as gaussian kernel for you16:07
@HeikoSlisitsyn: I see16:07
lisitsynyou just know it is a kerel16:07
@HeikoSso it would be16:07
lisitsynkernel16:07
lisitsynyou can get a list of its parameters16:07
@HeikoSbase.get("learnt_kernel").asKernel().get("width")16:08
@HeikoSah great, that is even better16:08
@HeikoSuser doesnt need to know about classes16:08
lisitsynyes16:08
lisitsynexactly16:08
@HeikoSlisitsyn: cool sorry I remember we talked about this16:08
@HeikoSsanuj: ok one more question16:08
lisitsynno worries16:08
@HeikoSlisitsyn: ^also to you16:08
lisitsynyes16:08
@HeikoSthe shogun ML interface16:08
@HeikoSshould better be better than the current one16:09
@HeikoSneeds a lot of iterations16:09
@HeikoSwhats the state of that?16:09
@HeikoSsanuj: I added some comments in a gist that sergey put up a while ago16:09
sanujokay the shogun-base class list16:09
@HeikoSsanuj: needs some mining of what we have in shogun and what there should be16:10
@HeikoSclasses of algos16:10
@HeikoSfeatures16:10
@HeikoSetc etc16:10
@HeikoSthats quite tricly16:10
@HeikoStricky16:10
sanujwiking told me to find abstract classes( and their parents) and add them to the list16:10
@HeikoSso better start a discussion on that soon as I expect this will cause quite a headache16:10
@HeikoSyes16:10
@HeikoSexactly16:10
@HeikoSa nice class hierarchy16:10
@HeikoSwith basic methods16:11
sanujthat gist is a .i file...we were planning to have renames of all classes in base-shogun16:11
@HeikoSyep16:11
@HeikoSah I see16:11
@HeikoSbut before we can write this class interace list16:11
@HeikoSwe need a list of algorithm classes16:11
@HeikoSthis comes first16:12
sanujyeah i saw your comments16:12
@HeikoScool16:12
@HeikoSmake sure to get that going soon16:12
sanujwill work on that tonight16:12
@HeikoScool16:12
@HeikoSlooking forward to see16:12
@HeikoSwow big changes16:12
@HeikoSscary16:12
sanujhaha16:12
sanujsure16:12
sanujhow come lisitsyn's all ideas fall into place for the new shogun interface16:13
@HeikoSsanuj: btw, also want to add another cookbook entry? :D16:13
sanujHeikoS, yeah16:13
@HeikoS(sorry for asking all these things, but feeling demandy today)16:13
sanujGMMs before coding begins16:13
@HeikoScool16:13
@HeikoSGMM is good16:13
sanuji asked about it before and you replied16:13
@HeikoSalso a good example of how the base interface is important16:13
@HeikoSsince GMM is a mixture distribution16:14
sanujhaven't started writing it but will do soon....will take some iterations to merge16:14
@HeikoSthat takes Gaussians as input16:14
@HeikoSand we need like log_pdf, grad, log_pdf_multiple16:14
@HeikoScool16:14
@HeikoSyeah16:14
@HeikoSmeta example is first step16:14
@HeikoSsanuj: was it you who added the linear ridge regression back then?16:14
sanujyeah16:14
sanuji added SVM too16:14
sanuj3 in total16:14
@HeikoSsanuj: check my last commit16:14
sanujokay16:15
@HeikoSI think that might be needed for gmm too16:15
@HeikoSi.e. guarding the meta examples in the test build if some requirement is not met16:15
sanujohkay16:15
@HeikoSminor thing, I also added it to the readme16:15
@HeikoSjust to keep the buildbot happy16:16
@HeikoSsanuj: ok it is looking good then16:16
@HeikoSthanks for the updates16:16
sanujokay :)16:16
sanujcool16:16
@HeikoSsanuj: oh another thin16:16
sanujyeah tell :)16:16
@HeikoSyou can think a bit about whether the meta example grammar has to be changed for plugins16:17
sanujhmm16:17
sanujyes16:17
@HeikoScool16:17
@HeikoSgotta run, see you later16:17
sanujbut that is later when we have the new interface16:17
sanuj?16:17
sanujHeikoS, ^16:17
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shogun-buildbotbuild #2871 of bsd1 - libshogun is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/2871  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>16:34
shogun-buildbotbuild #7 of xenial - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/xenial%20-%20libshogun/builds/7  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>16:36
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sanujlisitsyn, every plugin will have this function17:12
sanujconst char* Library::manifest_accessor_name = "aerManifest";17:12
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lisitsynsanuj: what function?17:13
sanujaerManifest17:13
lisitsynah yeah17:13
sanujor member17:13
lisitsynplugins exports this function17:13
sanujokay17:13
lisitsynthis is how you recognize17:13
lisitsynwhat function to call17:13
sanujhave you also written any plugin for this arch?17:14
sanujyes17:14
lisitsynno17:14
sanujokay17:14
lisitsynbut it should be straightforward17:14
sanujokay17:14
sanujhow shall i proceed now from here17:14
sanujif i take your plugin arch17:14
lisitsynwell take any algo17:14
lisitsynliblinear17:14
lisitsynor anything17:14
sanujand make plugin for that?17:15
sanujlisitsyn, heiko was also saying to add objects in my tag prototype17:15
sanujlike SGVector etc17:15
sanujshall i take those classes from shogun and add them?17:16
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@HeikoSSaurabh7: hi! any news on the things we discussed?18:24
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arianepaolaHi everyone20:11
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@thoralfHeyhey.21:10
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@wikingbuja22:00
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--- Log closed Thu May 19 00:00:02 2016